Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.09■□□□□ 0.01
SSNA1O43805 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.09■□□□□ 0.01
SSNA1O43805 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.09■□□□□ 0.01
SSNA1O43805 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.09■□□□□ 0.01
SSNA1O43805 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.09■□□□□ 0.01
SSNA1O43805 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
SSNA1O43805 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SSNA1O43805 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SSNA1O43805 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
SSNA1O43805 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SSNA1O43805 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.08■□□□□ 0.01
SSNA1O43805 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.08■□□□□ 0.01
SSNA1O43805 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SSNA1O43805 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SSNA1O43805 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SSNA1O43805 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SSNA1O43805 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.08■□□□□ 0.01
SSNA1O43805 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.08■□□□□ 0.01
SSNA1O43805 LINC00304-203ENST00000565008 1864 ntBASIC15.08■□□□□ 0.01
SSNA1O43805 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SSNA1O43805 PAUPAR-201ENST00000630360 2965 ntBASIC15.08■□□□□ 0
SSNA1O43805 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 HYI-206ENST00000372434 1025 ntTSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.08■□□□□ 0
SSNA1O43805 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
SSNA1O43805 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.08■□□□□ 0
SSNA1O43805 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.08■□□□□ 0
SSNA1O43805 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.08■□□□□ 0
SSNA1O43805 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 AL121832.2-201ENST00000610979 668 ntBASIC15.08■□□□□ 0
SSNA1O43805 HLA-A-209ENST00000638375 975 ntBASIC15.08■□□□□ 0
SSNA1O43805 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.08■□□□□ 0
SSNA1O43805 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 AC023824.1-201ENST00000562945 2975 ntBASIC15.08■□□□□ 0
SSNA1O43805 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.08■□□□□ 0
SSNA1O43805 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.08■□□□□ 0
SSNA1O43805 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SSNA1O43805 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.07■□□□□ 0
SSNA1O43805 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.07■□□□□ 0
SSNA1O43805 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SSNA1O43805 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.07■□□□□ 0
SSNA1O43805 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SSNA1O43805 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SSNA1O43805 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.07■□□□□ 0
SSNA1O43805 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms