Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.21■□□□□ 0.03
LYRM1O43325 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.21■□□□□ 0.03
LYRM1O43325 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
LYRM1O43325 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.21■□□□□ 0.03
LYRM1O43325 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYRM1O43325 AC078925.2-201ENST00000624013 1973 ntBASIC15.21■□□□□ 0.03
LYRM1O43325 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.21■□□□□ 0.03
LYRM1O43325 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.21■□□□□ 0.03
LYRM1O43325 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.21■□□□□ 0.03
LYRM1O43325 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.21■□□□□ 0.03
LYRM1O43325 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LYRM1O43325 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
LYRM1O43325 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYRM1O43325 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYRM1O43325 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYRM1O43325 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
LYRM1O43325 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYRM1O43325 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYRM1O43325 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.21■□□□□ 0.02
LYRM1O43325 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYRM1O43325 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.2■□□□□ 0.02
LYRM1O43325 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LYRM1O43325 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.2■□□□□ 0.02
LYRM1O43325 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.2■□□□□ 0.02
LYRM1O43325 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.2■□□□□ 0.02
LYRM1O43325 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.2■□□□□ 0.02
LYRM1O43325 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.2■□□□□ 0.02
LYRM1O43325 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LYRM1O43325 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LYRM1O43325 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.2■□□□□ 0.02
LYRM1O43325 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LYRM1O43325 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYRM1O43325 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 NFIC-211ENST00000641145 8399 ntBASIC15.19■□□□□ 0.02
LYRM1O43325 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LYRM1O43325 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LYRM1O43325 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.19■□□□□ 0.02
LYRM1O43325 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 AC016769.1-201ENST00000409132 1010 ntBASIC15.19■□□□□ 0.02
LYRM1O43325 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.19■□□□□ 0.02
LYRM1O43325 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.19■□□□□ 0.02
LYRM1O43325 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LYRM1O43325 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
LYRM1O43325 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYRM1O43325 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYRM1O43325 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LYRM1O43325 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LYRM1O43325 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LYRM1O43325 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms