Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.61■□□□□ 0.41
PHGDHO43175 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.61■□□□□ 0.41
PHGDHO43175 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PHGDHO43175 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PHGDHO43175 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
PHGDHO43175 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PHGDHO43175 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PHGDHO43175 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.6■□□□□ 0.41
PHGDHO43175 BX664615.1-201ENST00000443558 458 ntBASIC17.6■□□□□ 0.41
PHGDHO43175 KRT18P38-201ENST00000449496 1282 ntBASIC17.6■□□□□ 0.41
PHGDHO43175 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 AC112698.1-201ENST00000510299 916 ntBASIC17.6■□□□□ 0.41
PHGDHO43175 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.6■□□□□ 0.41
PHGDHO43175 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PHGDHO43175 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PHGDHO43175 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PHGDHO43175 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PHGDHO43175 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.59■□□□□ 0.41
PHGDHO43175 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PHGDHO43175 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 AC073508.3-201ENST00000619697 1419 ntBASIC17.59■□□□□ 0.41
PHGDHO43175 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PHGDHO43175 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 IGHGP-201ENST00000390555 1178 ntBASIC17.59■□□□□ 0.41
PHGDHO43175 FAM8A6P-201ENST00000407496 1135 ntBASIC17.59■□□□□ 0.41
PHGDHO43175 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 KRT18P57-201ENST00000443599 1254 ntBASIC17.59■□□□□ 0.41
PHGDHO43175 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.59■□□□□ 0.41
PHGDHO43175 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PHGDHO43175 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.59■□□□□ 0.41
PHGDHO43175 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.59■□□□□ 0.41
PHGDHO43175 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.59■□□□□ 0.41
PHGDHO43175 AC073912.3-201ENST00000624414 853 ntBASIC17.59■□□□□ 0.41
PHGDHO43175 AC097493.4-201ENST00000641197 219 ntBASIC17.59■□□□□ 0.41
PHGDHO43175 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.59■□□□□ 0.41
PHGDHO43175 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PHGDHO43175 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PHGDHO43175 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHGDHO43175 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHGDHO43175 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHGDHO43175 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHGDHO43175 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.58■□□□□ 0.41
PHGDHO43175 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PHGDHO43175 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PHGDHO43175 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PHGDHO43175 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.58■□□□□ 0.4
PHGDHO43175 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.58■□□□□ 0.4
PHGDHO43175 AC005521.1-201ENST00000393351 872 ntBASIC17.58■□□□□ 0.4
PHGDHO43175 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PHGDHO43175 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PHGDHO43175 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.58■□□□□ 0.4
PHGDHO43175 AP003733.1-201ENST00000491725 852 ntBASIC17.58■□□□□ 0.4
PHGDHO43175 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
PHGDHO43175 ZNF444P1-201ENST00000559497 298 ntBASIC17.58■□□□□ 0.4
PHGDHO43175 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms