Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 MIR1233-2-201ENST00000408138 82 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 MIR1233-1-201ENST00000408722 82 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 AC103564.2-201ENST00000432853 1299 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.9■□□□□ 0.62
SPTLC1O15269 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPTLC1O15269 AC092183.1-201ENST00000469884 875 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 AL049840.3-201ENST00000602669 611 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 AC004817.3-201ENST00000602957 2129 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTLC1O15269 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.9■□□□□ 0.62
SPTLC1O15269 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTLC1O15269 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SPTLC1O15269 AC132938.5-201ENST00000624980 1813 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.9■□□□□ 0.62
SPTLC1O15269 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTLC1O15269 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTLC1O15269 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.9■□□□□ 0.62
SPTLC1O15269 AL353593.2-201ENST00000602529 1483 ntBASIC18.9■□□□□ 0.62
SPTLC1O15269 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPTLC1O15269 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SPTLC1O15269 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPTLC1O15269 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SPTLC1O15269 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPTLC1O15269 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.89■□□□□ 0.62
SPTLC1O15269 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.89■□□□□ 0.61
SPTLC1O15269 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.89■□□□□ 0.61
SPTLC1O15269 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.89■□□□□ 0.61
SPTLC1O15269 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.89■□□□□ 0.61
SPTLC1O15269 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 AC025062.2-201ENST00000605477 670 ntBASIC18.89■□□□□ 0.61
SPTLC1O15269 AL773604.1-201ENST00000617417 272 ntBASIC18.89■□□□□ 0.61
SPTLC1O15269 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.89■□□□□ 0.61
SPTLC1O15269 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
SPTLC1O15269 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
SPTLC1O15269 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.89■□□□□ 0.61
SPTLC1O15269 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SPTLC1O15269 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 BX276092.7-203ENST00000637198 1536 ntBASIC18.89■□□□□ 0.61
SPTLC1O15269 AC079776.2-201ENST00000641154 1609 ntBASIC18.89■□□□□ 0.61
SPTLC1O15269 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPTLC1O15269 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTLC1O15269 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTLC1O15269 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.88■□□□□ 0.61
SPTLC1O15269 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SPTLC1O15269 AL031284.1-201ENST00000419297 478 ntBASIC18.88■□□□□ 0.61
SPTLC1O15269 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTLC1O15269 SCARNA2-201ENST00000458748 420 ntBASIC18.88■□□□□ 0.61
SPTLC1O15269 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPTLC1O15269 AF186996.4-201ENST00000467186 377 ntBASIC18.88■□□□□ 0.61
SPTLC1O15269 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.88■□□□□ 0.61
SPTLC1O15269 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.88■□□□□ 0.61
SPTLC1O15269 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.88■□□□□ 0.61
SPTLC1O15269 AC073592.5-201ENST00000624854 528 ntBASIC18.88■□□□□ 0.61
SPTLC1O15269 AF228730.7-201ENST00000641842 219 ntBASIC18.88■□□□□ 0.61
SPTLC1O15269 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SPTLC1O15269 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.88■□□□□ 0.61
SPTLC1O15269 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPTLC1O15269 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPTLC1O15269 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPTLC1O15269 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPTLC1O15269 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPTLC1O15269 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SPTLC1O15269 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SPTLC1O15269 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.87■□□□□ 0.61
SPTLC1O15269 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPTLC1O15269 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.87■□□□□ 0.61
SPTLC1O15269 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms