Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CHUKO15111 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.27■□□□□ 0.51
CHUKO15111 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CHUKO15111 AP001094.4-201ENST00000579008 2176 ntBASIC18.27■□□□□ 0.51
CHUKO15111 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHUKO15111 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHUKO15111 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CHUKO15111 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 KRT8P50-201ENST00000562022 1438 ntBASIC18.26■□□□□ 0.51
CHUKO15111 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.26■□□□□ 0.51
CHUKO15111 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 AP000593.1-201ENST00000393668 712 ntBASIC18.26■□□□□ 0.51
CHUKO15111 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 AL031133.1-201ENST00000406807 723 ntBASIC18.26■□□□□ 0.51
CHUKO15111 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.26■□□□□ 0.51
CHUKO15111 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 AC010240.3-201ENST00000607688 395 ntBASIC18.26■□□□□ 0.51
CHUKO15111 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.26■□□□□ 0.51
CHUKO15111 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.26■□□□□ 0.51
CHUKO15111 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.26■□□□□ 0.51
CHUKO15111 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.26■□□□□ 0.51
CHUKO15111 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.26■□□□□ 0.51
CHUKO15111 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHUKO15111 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
CHUKO15111 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CHUKO15111 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.25■□□□□ 0.51
CHUKO15111 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.25■□□□□ 0.51
CHUKO15111 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
CHUKO15111 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 ARMC10P1-201ENST00000313754 855 ntBASIC18.25■□□□□ 0.51
CHUKO15111 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 AC112907.2-201ENST00000448639 330 ntBASIC18.25■□□□□ 0.51
CHUKO15111 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 PCDHA1-201ENST00000378133 2726 ntBASIC18.25■□□□□ 0.51
CHUKO15111 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.25■□□□□ 0.51
CHUKO15111 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHUKO15111 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CHUKO15111 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHUKO15111 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHUKO15111 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.24■□□□□ 0.51
CHUKO15111 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.24■□□□□ 0.51
CHUKO15111 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.24■□□□□ 0.51
CHUKO15111 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.24■□□□□ 0.51
CHUKO15111 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHUKO15111 AL157888.1-201ENST00000631930 593 ntBASIC18.24■□□□□ 0.51
CHUKO15111 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms