Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.35□□□□□ -0.27
SOCS3O14543 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOCS3O14543 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOCS3O14543 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SOCS3O14543 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOCS3O14543 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
SOCS3O14543 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SOCS3O14543 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SOCS3O14543 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SOCS3O14543 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC13.34□□□□□ -0.27
SOCS3O14543 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SOCS3O14543 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
SOCS3O14543 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SOCS3O14543 AL645929.1-201ENST00000420084 975 ntBASIC13.34□□□□□ -0.27
SOCS3O14543 TMPOP1-202ENST00000424642 1267 ntBASIC13.34□□□□□ -0.27
SOCS3O14543 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.34□□□□□ -0.27
SOCS3O14543 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.34□□□□□ -0.27
SOCS3O14543 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.34□□□□□ -0.27
SOCS3O14543 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.34□□□□□ -0.27
SOCS3O14543 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.34□□□□□ -0.27
SOCS3O14543 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SOCS3O14543 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.34□□□□□ -0.27
SOCS3O14543 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SOCS3O14543 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.33□□□□□ -0.27
SOCS3O14543 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.33□□□□□ -0.28
SOCS3O14543 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.33□□□□□ -0.28
SOCS3O14543 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.33□□□□□ -0.28
SOCS3O14543 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.33□□□□□ -0.28
SOCS3O14543 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SOCS3O14543 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.33□□□□□ -0.28
SOCS3O14543 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SOCS3O14543 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
SOCS3O14543 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 CROCCP2-202ENST00000412962 2773 ntBASIC13.33□□□□□ -0.28
SOCS3O14543 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SOCS3O14543 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SOCS3O14543 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SOCS3O14543 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SOCS3O14543 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SOCS3O14543 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SOCS3O14543 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
SOCS3O14543 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SOCS3O14543 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms