Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 BX323043.1-201ENST00000641006 1765 ntBASIC16.62■□□□□ 0.25
NTN3O00634 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.62■□□□□ 0.25
NTN3O00634 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
NTN3O00634 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NTN3O00634 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.62■□□□□ 0.25
NTN3O00634 AP000344.2-201ENST00000512987 629 ntBASIC16.62■□□□□ 0.25
NTN3O00634 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NTN3O00634 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 AC027612.4-201ENST00000605371 583 ntBASIC16.62■□□□□ 0.25
NTN3O00634 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.62■□□□□ 0.25
NTN3O00634 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NTN3O00634 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NTN3O00634 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.61■□□□□ 0.25
NTN3O00634 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.61■□□□□ 0.25
NTN3O00634 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.61■□□□□ 0.25
NTN3O00634 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.61■□□□□ 0.25
NTN3O00634 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.61■□□□□ 0.25
NTN3O00634 AC091812.2-201ENST00000619081 385 ntBASIC16.61■□□□□ 0.25
NTN3O00634 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.61■□□□□ 0.25
NTN3O00634 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NTN3O00634 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.61■□□□□ 0.25
NTN3O00634 FLJ13224-201ENST00000313737 1514 ntBASIC16.6■□□□□ 0.25
NTN3O00634 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NTN3O00634 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.6■□□□□ 0.25
NTN3O00634 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.6■□□□□ 0.25
NTN3O00634 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.6■□□□□ 0.25
NTN3O00634 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 FAM185BP-201ENST00000443595 716 ntBASIC16.6■□□□□ 0.25
NTN3O00634 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.6■□□□□ 0.25
NTN3O00634 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.6■□□□□ 0.25
NTN3O00634 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.6■□□□□ 0.25
NTN3O00634 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.6■□□□□ 0.25
NTN3O00634 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.6■□□□□ 0.25
NTN3O00634 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.6■□□□□ 0.25
NTN3O00634 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NTN3O00634 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 AC092902.6-201ENST00000641783 218 ntBASIC16.6■□□□□ 0.25
NTN3O00634 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 AC120498.9-201ENST00000339021 3867 ntBASIC16.6■□□□□ 0.25
NTN3O00634 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.6■□□□□ 0.25
NTN3O00634 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NTN3O00634 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.6■□□□□ 0.25
NTN3O00634 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NTN3O00634 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms