Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RPL13AP23-201ENST00000480739 586 ntBASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC106730.1-201ENST00000566722 1090 ntBASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MIR1199-201ENST00000621445 119 ntBASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC098831.1-202ENST00000438821 336 ntBASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 STK19B-204ENST00000512515 211 ntBASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 KRT18P58-201ENST00000527480 1120 ntBASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC012640.2-201ENST00000561606 901 ntBASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 STK25P1-201ENST00000585406 838 ntBASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AL589182.2-201ENST00000619332 1049 ntBASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC004817.3-201ENST00000602957 2129 ntBASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 IGHV3-22-201ENST00000520721 359 ntBASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.65■□□□□ 0.42
C1QTNF3-AMACRE9PGA6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms