Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 AC129492.6-201ENST00000611383 1305 ntBASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 MIR1909-201ENST00000411312 80 ntBASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 TP53TG3HP-202ENST00000569755 579 ntBASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.35■□□□□ 0.85
TMEM88BA6NKF7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 IGHV3-52-201ENST00000519770 353 ntBASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 AL161645.1-201ENST00000622716 1255 ntBASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM88BA6NKF7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 AC138969.3-201ENST00000546612 1459 ntBASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 AC138932.2-201ENST00000548268 1459 ntBASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 AC126755.4-201ENST00000549796 1459 ntBASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 AL590560.3-201ENST00000623350 461 ntBASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM88BA6NKF7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM88BA6NKF7 AC100757.3-201ENST00000622361 1406 ntBASIC20.33■□□□□ 0.84
TMEM88BA6NKF7 AC022144.1-201ENST00000602255 1580 ntBASIC20.33■□□□□ 0.84
TMEM88BA6NKF7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM88BA6NKF7 GNAS-203ENST00000306120 1878 ntBASIC20.33■□□□□ 0.84
TMEM88BA6NKF7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 AC027369.6-201ENST00000525520 931 ntBASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 MIR6805-201ENST00000615055 62 ntBASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 AL032819.2-201ENST00000624543 2162 ntBASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM88BA6NKF7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms