Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 AL645929.1-201ENST00000420084 975 ntBASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 AC005104.2-201ENST00000427818 678 ntBASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 AD000864.1-201ENST00000624076 2295 ntBASIC19.48■□□□□ 0.71
TRIM49BA6NDI0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 TMPOP1-202ENST00000424642 1267 ntBASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM49BA6NDI0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 AC096633.1-201ENST00000422446 749 ntBASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM49BA6NDI0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM49BA6NDI0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM49BA6NDI0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms