Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 AL139400.1-201ENST00000366220 510 ntBASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 LINC00982-205ENST00000420957 435 ntBASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 IGHV3-52-201ENST00000519770 353 ntBASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 AC023141.13-201ENST00000604991 943 ntBASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 AC007064.4-201ENST00000637740 555 ntBASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.39■□□□□ 0.53
HCFC2Q9Y5Z7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 AC116407.2-201ENST00000613639 860 ntBASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HCFC2Q9Y5Z7 AC009949.1-201ENST00000623048 1830 ntBASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 SPCS2P1-201ENST00000561636 679 ntBASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 AL513210.1-201ENST00000629608 234 ntBASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HCFC2Q9Y5Z7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HCFC2Q9Y5Z7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms