Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PCDHAC2Q9Y5I4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHAC2Q9Y5I4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHAC2Q9Y5I4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 MKNK2P1-201ENST00000437526 628 ntBASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 RHOQP3-201ENST00000437982 621 ntBASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 AC096734.2-201ENST00000562054 433 ntBASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHAC2Q9Y5I4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHAC2Q9Y5I4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHAC2Q9Y5I4 BX276092.7-203ENST00000637198 1536 ntBASIC20.89■□□□□ 0.94
PCDHAC2Q9Y5I4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PCDHAC2Q9Y5I4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHAC2Q9Y5I4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHAC2Q9Y5I4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 AL139400.1-201ENST00000366220 510 ntBASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 AC106028.4-201ENST00000614509 607 ntBASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHAC2Q9Y5I4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 FAM58CP-201ENST00000435741 640 ntBASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHAC2Q9Y5I4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 AP002414.1-201ENST00000391405 1147 ntBASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 AP002472.1-201ENST00000577490 586 ntBASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 AC093028.1-201ENST00000622998 982 ntBASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHAC2Q9Y5I4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHAC2Q9Y5I4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms