Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSX2IPQ9Y2D8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 POLD2P1-201ENST00000511220 997 ntBASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 AC092865.5-201ENST00000545435 363 ntBASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SSX2IPQ9Y2D8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.02■□□□□ 0.63
SSX2IPQ9Y2D8 ANO7L1-203ENST00000602586 1720 ntBASIC19.02■□□□□ 0.63
SSX2IPQ9Y2D8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.02■□□□□ 0.63
SSX2IPQ9Y2D8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.02■□□□□ 0.63
SSX2IPQ9Y2D8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.02■□□□□ 0.63
SSX2IPQ9Y2D8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SSX2IPQ9Y2D8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 IGHV3-22-201ENST00000520721 359 ntBASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 AP000867.4-201ENST00000641616 219 ntBASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSX2IPQ9Y2D8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 AL591424.1-201ENST00000442569 1213 ntBASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19■□□□□ 0.63
SSX2IPQ9Y2D8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms