Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.05■□□□□ 0.48
CHMP2BQ9UQN3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 KRT18P65-201ENST00000439811 1286 ntBASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 AL023973.1-201ENST00000624619 620 ntBASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 NKILA-202ENST00000614771 2598 ntBASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 AC011676.5-201ENST00000624864 2660 ntBASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CHMP2BQ9UQN3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 DDX43P3-201ENST00000441064 443 ntBASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CHMP2BQ9UQN3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AC034232.1-201ENST00000506026 1064 ntBASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 AC079602.3-201ENST00000623931 403 ntBASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CHMP2BQ9UQN3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CHMP2BQ9UQN3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHMP2BQ9UQN3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms