Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 LIN28AP1-201ENST00000429574 405 ntBASIC20.8■□□□□ 0.92
SMC3Q9UQE7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 AC093827.2-201ENST00000512654 315 ntBASIC20.8■□□□□ 0.92
SMC3Q9UQE7 AC010203.1-204ENST00000548782 407 ntBASIC20.8■□□□□ 0.92
SMC3Q9UQE7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 AC009154.2-201ENST00000621177 724 ntBASIC20.8■□□□□ 0.92
SMC3Q9UQE7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SMC3Q9UQE7 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.79■□□□□ 0.92
SMC3Q9UQE7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 TSPY12P-201ENST00000421279 868 ntBASIC20.79■□□□□ 0.92
SMC3Q9UQE7 ATP5G1P1-201ENST00000448724 379 ntBASIC20.79■□□□□ 0.92
SMC3Q9UQE7 COX11P1-201ENST00000489116 835 ntBASIC20.79■□□□□ 0.92
SMC3Q9UQE7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 AL031432.5-201ENST00000641059 760 ntBASIC20.79■□□□□ 0.92
SMC3Q9UQE7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMC3Q9UQE7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.78■□□□□ 0.92
SMC3Q9UQE7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 SPDYE15P-201ENST00000424157 909 ntBASIC20.77■□□□□ 0.92
SMC3Q9UQE7 HLA-F-220ENST00000434407 884 ntBASIC20.77■□□□□ 0.92
SMC3Q9UQE7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 AC112698.1-201ENST00000510299 916 ntBASIC20.77■□□□□ 0.92
SMC3Q9UQE7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SMC3Q9UQE7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMC3Q9UQE7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SMC3Q9UQE7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SMC3Q9UQE7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SMC3Q9UQE7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SMC3Q9UQE7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMC3Q9UQE7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms