Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 PDPK2P-202ENST00000562415 1191 ntBASIC20.29■□□□□ 0.84
PNMA3Q9UL41 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 GGTLC5P-201ENST00000617623 998 ntBASIC20.29■□□□□ 0.84
PNMA3Q9UL41 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PNMA3Q9UL41 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 STK19B-204ENST00000512515 211 ntBASIC20.28■□□□□ 0.84
PNMA3Q9UL41 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 AC096734.2-201ENST00000562054 433 ntBASIC20.28■□□□□ 0.84
PNMA3Q9UL41 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 AC019129.2-201ENST00000609837 1235 ntBASIC20.28■□□□□ 0.84
PNMA3Q9UL41 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 AL031598.1-201ENST00000561511 1773 ntBASIC20.28■□□□□ 0.84
PNMA3Q9UL41 AC026471.1-201ENST00000564629 3026 ntBASIC20.28■□□□□ 0.84
PNMA3Q9UL41 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PNMA3Q9UL41 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 AP002414.1-201ENST00000391405 1147 ntBASIC20.27■□□□□ 0.84
PNMA3Q9UL41 IGLL3P-201ENST00000412472 434 ntBASIC20.27■□□□□ 0.84
PNMA3Q9UL41 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 IGHV3-52-201ENST00000519770 353 ntBASIC20.27■□□□□ 0.84
PNMA3Q9UL41 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 AC109462.3-201ENST00000573934 613 ntBASIC20.27■□□□□ 0.84
PNMA3Q9UL41 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PNMA3Q9UL41 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PNMA3Q9UL41 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.27■□□□□ 0.83
PNMA3Q9UL41 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.27■□□□□ 0.83
PNMA3Q9UL41 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 ACTG1P14-201ENST00000446382 1122 ntBASIC20.26■□□□□ 0.83
PNMA3Q9UL41 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.26■□□□□ 0.83
PNMA3Q9UL41 STK25P1-201ENST00000585406 838 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms