Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC010653.2-201ENST00000623505 997 ntBASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 LINC00167-201ENST00000530583 1419 ntBASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC011676.5-201ENST00000624864 2660 ntBASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC009947.2-201ENST00000444014 672 ntBASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 MIR4785-201ENST00000585005 73 ntBASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC009949.1-201ENST00000623048 1830 ntBASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC124067.4-201ENST00000519691 2379 ntBASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NIPSNAP3AQ9UFN0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 AL121761.2-201ENST00000598007 1648 ntBASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 TSPY7P-201ENST00000431358 1114 ntBASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 AC092865.7-201ENST00000641832 219 ntBASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NIPSNAP3AQ9UFN0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms