Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 HOMER2P1-201ENST00000455653 964 ntBASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 AC116407.2-201ENST00000613639 860 ntBASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 AC006011.2-201ENST00000621313 1158 ntBASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LIN7CQ9NUP9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 AD000864.1-201ENST00000624076 2295 ntBASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 AC024243.1-201ENST00000609234 778 ntBASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LIN7CQ9NUP9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 TSPY5P-201ENST00000426936 936 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 AC092647.4-201ENST00000457211 535 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 SEC1P-202ENST00000473944 940 ntBASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.72□□□□□ -0.05
LIN7CQ9NUP9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms