Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 PP12613-201ENST00000424958 2230 ntBASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 AL645608.8-201ENST00000606034 2086 ntBASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEUROD4Q9HD90 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 AC112907.2-201ENST00000448639 330 ntBASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 AC063952.2-201ENST00000498792 1227 ntBASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 AC141586.5-201ENST00000624546 2050 ntBASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
NEUROD4Q9HD90 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 REXO1L11P-201ENST00000620964 1927 ntBASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 KRT18P38-201ENST00000449496 1282 ntBASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NEUROD4Q9HD90 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NEUROD4Q9HD90 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms