Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
CBX8Q9HC52 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CBX8Q9HC52 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
CBX8Q9HC52 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
CBX8Q9HC52 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
CBX8Q9HC52 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CBX8Q9HC52 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CBX8Q9HC52 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 CCR12P-201ENST00000446203 998 ntBASIC19.75■□□□□ 0.75
CBX8Q9HC52 TSPY20P-201ENST00000450910 630 ntBASIC19.75■□□□□ 0.75
CBX8Q9HC52 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 AC026471.5-201ENST00000615068 467 ntBASIC19.75■□□□□ 0.75
CBX8Q9HC52 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 AL049637.2-201ENST00000641778 930 ntBASIC19.75■□□□□ 0.75
CBX8Q9HC52 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CBX8Q9HC52 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CBX8Q9HC52 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CBX8Q9HC52 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CBX8Q9HC52 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms