Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SND1-IT1Q9HBX3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 PCDHB19P-201ENST00000570871 2371 ntBASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.51
SND1-IT1Q9HBX3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 AC009102.3-201ENST00000623118 1491 ntBASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 GPAT2P1-201ENST00000444924 1672 ntBASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 SDHAP2-201ENST00000455183 2001 ntBASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SND1-IT1Q9HBX3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 AL163051.1-201ENST00000569214 1512 ntBASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 MIR149-201ENST00000384879 89 ntBASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 AC093010.1-201ENST00000473625 1624 ntBASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SND1-IT1Q9HBX3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms