Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH20Q9HBT6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.49■□□□□ 0.07
CDH20Q9HBT6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 AC233702.3-201ENST00000578656 1387 ntBASIC15.49■□□□□ 0.07
CDH20Q9HBT6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH20Q9HBT6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 MINOS1P3-201ENST00000457048 203 ntBASIC15.48■□□□□ 0.07
CDH20Q9HBT6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 AC074051.2-201ENST00000565115 352 ntBASIC15.48■□□□□ 0.07
CDH20Q9HBT6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 KRT8P47-201ENST00000604727 1398 ntBASIC15.48■□□□□ 0.07
CDH20Q9HBT6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDH20Q9HBT6 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.48■□□□□ 0.07
CDH20Q9HBT6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms