Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.08■□□□□ 0.33
LIN28AQ9H9Z2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
LIN28AQ9H9Z2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LIN28AQ9H9Z2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 AL121956.5-201ENST00000625261 221 ntBASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN28AQ9H9Z2 AC008741.2-201ENST00000612792 3115 ntBASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 AL136038.4-201ENST00000603606 1261 ntBASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.07■□□□□ 0.32
LIN28AQ9H9Z2 MYLKP1-201ENST00000509077 1580 ntBASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 AL163051.1-201ENST00000569214 1512 ntBASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN28AQ9H9Z2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN28AQ9H9Z2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms