Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRN3Q9H3W5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 AC010460.3-201ENST00000511359 1579 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 MED15P5-201ENST00000423150 992 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 LAGE3P1-201ENST00000425356 484 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 BX005266.1-201ENST00000473402 457 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 AC140113.2-201ENST00000604370 208 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 FAM197Y3-203ENST00000618346 717 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 PHGDH-209ENST00000641074 1780 ntBASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRN3Q9H3W5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 AL356488.2-201ENST00000602755 427 ntBASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 AL022326.1-202ENST00000641533 845 ntBASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRN3Q9H3W5 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 AC005332.8-201ENST00000622750 2735 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 AL591424.1-201ENST00000442569 1213 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 PGAM5P1-201ENST00000518923 814 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 DUTP2-201ENST00000519164 463 ntBASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRN3Q9H3W5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms