Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 KRT18P55-202ENST00000578578 1546 ntBASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 PTBP1P-201ENST00000554374 1601 ntBASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
CYSTM1Q9H1C7 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 HES6-205ENST00000409356 528 ntTSL 2 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 RARRES2P11-201ENST00000635158 484 ntBASIC10.21□□□□□ -0.77
CYSTM1Q9H1C7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 AC010491.1-201ENST00000563101 2797 ntBASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.21□□□□□ -0.78
CYSTM1Q9H1C7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
CYSTM1Q9H1C7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms