Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC022211.2-201ENST00000585075 2527 ntBASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 DDX43P3-201ENST00000441064 443 ntBASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 AC116407.4-201ENST00000623319 1061 ntBASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 AC099398.1-201ENST00000567919 2776 ntBASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXP3Q9BZS1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 KRT18P48-201ENST00000434763 852 ntBASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 HCG4P8-203ENST00000443049 980 ntBASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 KRT126P-201ENST00000549467 1181 ntBASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 AC124067.4-201ENST00000519691 2379 ntBASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXP3Q9BZS1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 NKILA-202ENST00000614771 2598 ntBASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 AC083849.1-201ENST00000615227 514 ntBASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXP3Q9BZS1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
FOXP3Q9BZS1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms