Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH11YQ9BZA8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 WIZP1-201ENST00000531444 2299 ntBASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 FAM8A3P-201ENST00000427218 844 ntBASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 AC004835.2-201ENST00000603762 682 ntBASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11YQ9BZA8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 AC011467.4-201ENST00000594891 528 ntBASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PCDH11YQ9BZA8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 AC105339.1-204ENST00000636249 355 ntBASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11YQ9BZA8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 AL020996.1-203ENST00000536896 2307 ntBASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 AC004461.1-201ENST00000412461 403 ntBASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 AC092364.2-202ENST00000597012 1073 ntBASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11YQ9BZA8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms