Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH11XQ9BZA7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 WIZP1-201ENST00000531444 2299 ntBASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 DDT-204ENST00000404092 805 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 FAM8A3P-201ENST00000427218 844 ntBASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 AC004835.2-201ENST00000603762 682 ntBASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH11XQ9BZA7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 AC011467.4-201ENST00000594891 528 ntBASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PCDH11XQ9BZA7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 AC105339.1-204ENST00000636249 355 ntBASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH11XQ9BZA7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 AL020996.1-203ENST00000536896 2307 ntBASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDH11XQ9BZA7 AC004461.1-201ENST00000412461 403 ntBASIC22.74■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms