Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 DOC2GP-204ENST00000639052 2548 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 INGX-201ENST00000359239 846 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 HSFY1P1-201ENST00000423928 1178 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AC233702.5-201ENST00000584107 538 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AL137246.1-201ENST00000607072 977 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AC026471.5-201ENST00000615068 467 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AC027281.2-201ENST00000623856 713 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AL049637.2-201ENST00000641778 930 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 RNF216P1-203ENST00000404404 2427 ntBASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
KRTAP3-1Q9BYR8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 SLC25A1P3-201ENST00000395415 828 ntBASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 AL355355.2-201ENST00000442321 338 ntBASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 RBM17P1-201ENST00000453646 1190 ntBASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
KRTAP3-1Q9BYR8 CD99P1-205ENST00000527459 561 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms