Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
LCE3DQ9BYE3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AC105020.1-201ENST00000435356 2205 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 RCC2P3-201ENST00000418112 1537 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 KRT8P41-201ENST00000533985 1514 ntBASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LCE3DQ9BYE3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms