Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 REXO1L9P-201ENST00000604264 2108 ntBASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSBP3Q9BWW4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 AC097374.2-201ENST00000618617 1306 ntBASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 INTS4P1-201ENST00000438455 1935 ntBASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SSBP3Q9BWW4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 AL121912.1-201ENST00000603683 238 ntBASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 AC116407.2-201ENST00000613639 860 ntBASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 AL031008.1-201ENST00000619963 541 ntBASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.77□□□□□ -0.05
SSBP3Q9BWW4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 KRT8P47-201ENST00000604727 1398 ntBASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AP000997.3-201ENST00000623333 2250 ntBASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AKR1C7P-201ENST00000305623 895 ntBASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 FAM220CP-201ENST00000395253 831 ntBASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AC132008.2-207ENST00000454517 770 ntBASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SSBP3Q9BWW4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms