Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 AC007967.3-201ENST00000434308 558 ntBASIC16.91■□□□□ 0.3
NDC1Q9BTX1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 AF238378.1-201ENST00000526806 358 ntBASIC16.91■□□□□ 0.3
NDC1Q9BTX1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 AC008608.2-201ENST00000606089 416 ntBASIC16.91■□□□□ 0.3
NDC1Q9BTX1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 ABALON-201ENST00000629058 1903 ntBASIC16.91■□□□□ 0.3
NDC1Q9BTX1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 REXO1L9P-201ENST00000604264 2108 ntBASIC16.91■□□□□ 0.3
NDC1Q9BTX1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NDC1Q9BTX1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 KRT8P47-201ENST00000604727 1398 ntBASIC16.9■□□□□ 0.3
NDC1Q9BTX1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 RBM17P3-201ENST00000417687 1192 ntBASIC16.9■□□□□ 0.3
NDC1Q9BTX1 AC096633.1-201ENST00000422446 749 ntBASIC16.9■□□□□ 0.3
NDC1Q9BTX1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 AC104692.2-201ENST00000603054 253 ntBASIC16.9■□□□□ 0.3
NDC1Q9BTX1 AC064862.7-201ENST00000604520 867 ntBASIC16.9■□□□□ 0.3
NDC1Q9BTX1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDC1Q9BTX1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NDC1Q9BTX1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDC1Q9BTX1 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDC1Q9BTX1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NDC1Q9BTX1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 FDX1P1-201ENST00000449115 551 ntBASIC16.89■□□□□ 0.29
NDC1Q9BTX1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AP002469.2-201ENST00000531724 424 ntBASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AL662844.1-201ENST00000546340 181 ntBASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NDC1Q9BTX1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms