Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 AC132872.4-202ENST00000622924 2756 ntBASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.67■□□□□ 0.58
RHOXF2Q9BQY4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 AC011506.1-201ENST00000474329 610 ntBASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOXF2Q9BQY4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 MIR5787-201ENST00000611784 55 ntBASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 PCDHB17P-201ENST00000539533 2393 ntBASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 KRT16P1-201ENST00000399124 1418 ntBASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOXF2Q9BQY4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RHOXF2Q9BQY4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.64■□□□□ 0.58
RHOXF2Q9BQY4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
RHOXF2Q9BQY4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 KRT17P3-201ENST00000420566 1262 ntBASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RHOXF2Q9BQY4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms