Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ARID3AQ99856 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARID3AQ99856 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.17■□□□□ 0.82
ARID3AQ99856 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
ARID3AQ99856 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.17■□□□□ 0.82
ARID3AQ99856 CA15P1-201ENST00000481698 905 ntBASIC20.17■□□□□ 0.82
ARID3AQ99856 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.17■□□□□ 0.82
ARID3AQ99856 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.17■□□□□ 0.82
ARID3AQ99856 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ARID3AQ99856 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.17■□□□□ 0.82
ARID3AQ99856 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.17■□□□□ 0.82
ARID3AQ99856 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.17■□□□□ 0.82
ARID3AQ99856 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ARID3AQ99856 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARID3AQ99856 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.17■□□□□ 0.82
ARID3AQ99856 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ARID3AQ99856 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.16■□□□□ 0.82
ARID3AQ99856 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.16■□□□□ 0.82
ARID3AQ99856 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.16■□□□□ 0.82
ARID3AQ99856 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 AC073912.3-201ENST00000624414 853 ntBASIC20.16■□□□□ 0.82
ARID3AQ99856 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ARID3AQ99856 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARID3AQ99856 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.15■□□□□ 0.82
ARID3AQ99856 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 AL365209.1-201ENST00000624418 6473 ntBASIC20.15■□□□□ 0.82
ARID3AQ99856 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC20.15■□□□□ 0.82
ARID3AQ99856 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 PCDHA1-201ENST00000378133 2726 ntBASIC20.15■□□□□ 0.82
ARID3AQ99856 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ARID3AQ99856 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ARID3AQ99856 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ARID3AQ99856 AC087499.1-201ENST00000418141 1075 ntBASIC20.15■□□□□ 0.82
ARID3AQ99856 SLC25A1P2-201ENST00000430693 912 ntBASIC20.15■□□□□ 0.82
ARID3AQ99856 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.15■□□□□ 0.82
ARID3AQ99856 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.15■□□□□ 0.82
ARID3AQ99856 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.15■□□□□ 0.82
ARID3AQ99856 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 AC092338.2-201ENST00000568827 1415 ntBASIC20.15■□□□□ 0.82
ARID3AQ99856 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ARID3AQ99856 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.15■□□□□ 0.82
ARID3AQ99856 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 AC008556.1-201ENST00000610908 2040 ntBASIC20.15■□□□□ 0.82
ARID3AQ99856 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ARID3AQ99856 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.15■□□□□ 0.82
ARID3AQ99856 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.15■□□□□ 0.82
ARID3AQ99856 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.15■□□□□ 0.82
ARID3AQ99856 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARID3AQ99856 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ARID3AQ99856 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ARID3AQ99856 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ARID3AQ99856 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ARID3AQ99856 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
ARID3AQ99856 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ARID3AQ99856 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ARID3AQ99856 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms