Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM9SF2Q99805 AC046158.3-201ENST00000624947 2558 ntBASIC16.46■□□□□ 0.23
TM9SF2Q99805 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM9SF2Q99805 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TM9SF2Q99805 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TM9SF2Q99805 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM9SF2Q99805 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TM9SF2Q99805 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TM9SF2Q99805 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TM9SF2Q99805 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.46■□□□□ 0.22
TM9SF2Q99805 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
TM9SF2Q99805 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.22
TM9SF2Q99805 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 KRT18P48-201ENST00000434763 852 ntBASIC16.45■□□□□ 0.22
TM9SF2Q99805 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 KRT18P41-201ENST00000518924 1277 ntBASIC16.45■□□□□ 0.22
TM9SF2Q99805 KRT8P26-201ENST00000534154 1276 ntBASIC16.45■□□□□ 0.22
TM9SF2Q99805 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 MST1L-201ENST00000442552 2185 ntBASIC16.45■□□□□ 0.22
TM9SF2Q99805 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.45■□□□□ 0.22
TM9SF2Q99805 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 AC112777.1-201ENST00000540175 1423 ntBASIC16.45■□□□□ 0.22
TM9SF2Q99805 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TM9SF2Q99805 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 PP12613-201ENST00000424958 2230 ntBASIC16.44■□□□□ 0.22
TM9SF2Q99805 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 TSSC2-201ENST00000450217 709 ntBASIC16.44■□□□□ 0.22
TM9SF2Q99805 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TM9SF2Q99805 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM9SF2Q99805 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.43■□□□□ 0.22
TM9SF2Q99805 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.43■□□□□ 0.22
TM9SF2Q99805 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TM9SF2Q99805 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TM9SF2Q99805 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM9SF2Q99805 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.43■□□□□ 0.22
TM9SF2Q99805 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms