Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
LITAFQ99732 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.78□□□□□ -0.52
LITAFQ99732 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.78□□□□□ -0.52
LITAFQ99732 ZNRF2P3-201ENST00000424200 374 ntBASIC11.78□□□□□ -0.52
LITAFQ99732 DDX43P3-201ENST00000441064 443 ntBASIC11.78□□□□□ -0.52
LITAFQ99732 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 RHEB-204ENST00000472642 900 ntTSL 3 BASIC11.78□□□□□ -0.52
LITAFQ99732 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC11.78□□□□□ -0.52
LITAFQ99732 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LITAFQ99732 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC11.78□□□□□ -0.52
LITAFQ99732 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 AC092384.3-202ENST00000564646 2873 ntBASIC11.78□□□□□ -0.52
LITAFQ99732 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LITAFQ99732 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
LITAFQ99732 KRT8P9-201ENST00000558927 1449 ntBASIC11.77□□□□□ -0.52
LITAFQ99732 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LITAFQ99732 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
LITAFQ99732 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
LITAFQ99732 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LITAFQ99732 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.77□□□□□ -0.53
LITAFQ99732 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 SLC25A1P3-201ENST00000395415 828 ntBASIC11.77□□□□□ -0.53
LITAFQ99732 LGR4-203ENST00000480977 492 ntTSL 2 BASIC11.77□□□□□ -0.53
LITAFQ99732 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.77□□□□□ -0.53
LITAFQ99732 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC11.77□□□□□ -0.53
LITAFQ99732 MIR3180-5-201ENST00000583743 153 ntBASIC11.77□□□□□ -0.53
LITAFQ99732 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 MYB-201ENST00000316528 3571 ntTSL 5 BASIC11.77□□□□□ -0.53
LITAFQ99732 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC11.77□□□□□ -0.53
LITAFQ99732 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.77□□□□□ -0.53
LITAFQ99732 MYB-241ENST00000616088 3573 ntTSL 5 BASIC11.77□□□□□ -0.53
LITAFQ99732 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.77□□□□□ -0.53
LITAFQ99732 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LITAFQ99732 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.77□□□□□ -0.53
LITAFQ99732 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LITAFQ99732 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 LINC01311-201ENST00000565162 1445 ntBASIC11.77□□□□□ -0.53
LITAFQ99732 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.77□□□□□ -0.53
LITAFQ99732 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LITAFQ99732 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC11.76□□□□□ -0.53
LITAFQ99732 AL136379.1-201ENST00000623471 2642 ntBASIC11.76□□□□□ -0.53
LITAFQ99732 PKD1P1-201ENST00000458669 6805 ntBASIC11.76□□□□□ -0.53
LITAFQ99732 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LITAFQ99732 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms