Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC108073.2-201ENST00000464002 357 ntBASIC17.86■□□□□ 0.45
PHOX2BQ99453 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 LINC02560-201ENST00000596379 459 ntBASIC17.86■□□□□ 0.45
PHOX2BQ99453 AC073592.5-201ENST00000624854 528 ntBASIC17.86■□□□□ 0.45
PHOX2BQ99453 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PHOX2BQ99453 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PHOX2BQ99453 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.85■□□□□ 0.45
PHOX2BQ99453 AC004877.2-201ENST00000623941 599 ntBASIC17.85■□□□□ 0.45
PHOX2BQ99453 AL022326.1-202ENST00000641533 845 ntBASIC17.85■□□□□ 0.45
PHOX2BQ99453 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PHOX2BQ99453 AIRN-201ENST00000601203 4374 ntBASIC17.84■□□□□ 0.45
PHOX2BQ99453 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AL032819.2-201ENST00000624543 2162 ntBASIC17.84■□□□□ 0.45
PHOX2BQ99453 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AC005332.8-201ENST00000622750 2735 ntBASIC17.84■□□□□ 0.45
PHOX2BQ99453 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.84■□□□□ 0.45
PHOX2BQ99453 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AC023141.5-201ENST00000458585 616 ntBASIC17.84■□□□□ 0.45
PHOX2BQ99453 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AC008761.3-201ENST00000624803 892 ntBASIC17.84■□□□□ 0.45
PHOX2BQ99453 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PHOX2BQ99453 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
PHOX2BQ99453 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.83■□□□□ 0.45
PHOX2BQ99453 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.83■□□□□ 0.45
PHOX2BQ99453 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PHOX2BQ99453 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
PHOX2BQ99453 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PHOX2BQ99453 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms