Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 AL139288.1-201ENST00000623748 933 ntBASIC18.66■□□□□ 0.58
GCNAQ96QF7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 PKD1P1-201ENST00000458669 6805 ntBASIC18.66■□□□□ 0.58
GCNAQ96QF7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.66■□□□□ 0.58
GCNAQ96QF7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GCNAQ96QF7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 AC093010.1-201ENST00000473625 1624 ntBASIC18.65■□□□□ 0.58
GCNAQ96QF7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 PMS2P1-201ENST00000431037 1228 ntBASIC18.65■□□□□ 0.58
GCNAQ96QF7 AC139887.3-201ENST00000568585 713 ntBASIC18.65■□□□□ 0.58
GCNAQ96QF7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 AC097374.2-201ENST00000618617 1306 ntBASIC18.65■□□□□ 0.58
GCNAQ96QF7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GCNAQ96QF7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GCNAQ96QF7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNAQ96QF7 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
GCNAQ96QF7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.64■□□□□ 0.58
GCNAQ96QF7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.64■□□□□ 0.58
GCNAQ96QF7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
GCNAQ96QF7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNAQ96QF7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
GCNAQ96QF7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 AC020916.1-201ENST00000587762 1774 ntBASIC18.64■□□□□ 0.57
GCNAQ96QF7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 AC007967.3-201ENST00000434308 558 ntBASIC18.64■□□□□ 0.57
GCNAQ96QF7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 FAM215A-202ENST00000632077 792 ntBASIC18.64■□□□□ 0.57
GCNAQ96QF7 AF228730.7-201ENST00000641842 219 ntBASIC18.64■□□□□ 0.57
GCNAQ96QF7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GCNAQ96QF7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.64■□□□□ 0.57
GCNAQ96QF7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 PHGDH-209ENST00000641074 1780 ntBASIC18.63■□□□□ 0.57
GCNAQ96QF7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 SART3-203ENST00000546611 1184 ntBASIC18.63■□□□□ 0.57
GCNAQ96QF7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 MIR7706-201ENST00000613747 67 ntBASIC18.63■□□□□ 0.57
GCNAQ96QF7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.63■□□□□ 0.57
GCNAQ96QF7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.63■□□□□ 0.57
GCNAQ96QF7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GCNAQ96QF7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms