Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF4Q96M43 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
NBPF4Q96M43 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 MKNK2P1-201ENST00000437526 628 ntBASIC23.17■■□□□ 1.3
NBPF4Q96M43 RHOQP3-201ENST00000437982 621 ntBASIC23.17■■□□□ 1.3
NBPF4Q96M43 AC002558.1-201ENST00000488906 803 ntBASIC23.17■■□□□ 1.3
NBPF4Q96M43 AC096734.2-201ENST00000562054 433 ntBASIC23.17■■□□□ 1.3
NBPF4Q96M43 PDPK2P-202ENST00000562415 1191 ntBASIC23.17■■□□□ 1.3
NBPF4Q96M43 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 ELL2P1-201ENST00000413990 1906 ntBASIC23.17■■□□□ 1.3
NBPF4Q96M43 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NBPF4Q96M43 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.17■■□□□ 1.3
NBPF4Q96M43 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC23.16■■□□□ 1.3
NBPF4Q96M43 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.16■■□□□ 1.3
NBPF4Q96M43 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.16■■□□□ 1.3
NBPF4Q96M43 KRT19P2-202ENST00000557173 1012 ntBASIC23.16■■□□□ 1.3
NBPF4Q96M43 SNHG9-202ENST00000564014 471 ntBASIC23.16■■□□□ 1.3
NBPF4Q96M43 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC23.16■■□□□ 1.3
NBPF4Q96M43 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NBPF4Q96M43 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 STK4-201ENST00000372801 2038 ntTSL 2 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 LINC02084-201ENST00000606069 1096 ntBASIC23.15■■□□□ 1.3
NBPF4Q96M43 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 AC120498.9-201ENST00000339021 3867 ntBASIC23.15■■□□□ 1.3
NBPF4Q96M43 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NBPF4Q96M43 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.15■■□□□ 1.3
NBPF4Q96M43 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NBPF4Q96M43 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.14■■□□□ 1.3
NBPF4Q96M43 BCAR1-209ENST00000546196 1340 ntBASIC23.14■■□□□ 1.3
NBPF4Q96M43 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NBPF4Q96M43 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC23.14■■□□□ 1.29
NBPF4Q96M43 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NBPF4Q96M43 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC23.14■■□□□ 1.29
NBPF4Q96M43 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC23.14■■□□□ 1.29
NBPF4Q96M43 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.14■■□□□ 1.29
NBPF4Q96M43 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.14■■□□□ 1.29
NBPF4Q96M43 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NBPF4Q96M43 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC23.14■■□□□ 1.29
NBPF4Q96M43 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
NBPF4Q96M43 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 CNN2P11-201ENST00000429351 262 ntBASIC23.13■■□□□ 1.29
NBPF4Q96M43 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC23.13■■□□□ 1.29
NBPF4Q96M43 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC23.13■■□□□ 1.29
NBPF4Q96M43 CEND1P1-201ENST00000451006 455 ntBASIC23.13■■□□□ 1.29
NBPF4Q96M43 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC23.13■■□□□ 1.29
NBPF4Q96M43 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC23.13■■□□□ 1.29
NBPF4Q96M43 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NBPF4Q96M43 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
NBPF4Q96M43 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NBPF4Q96M43 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NBPF4Q96M43 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.12■■□□□ 1.29
NBPF4Q96M43 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
NBPF4Q96M43 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NBPF4Q96M43 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NBPF4Q96M43 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NBPF4Q96M43 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms