Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 STK19B-204ENST00000512515 211 ntBASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 STK25P1-201ENST00000585406 838 ntBASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 AC108073.2-201ENST00000464002 357 ntBASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 RPS15P9-201ENST00000494093 319 ntBASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC74BQ96LY2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 BX323043.1-201ENST00000641006 1765 ntBASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC74BQ96LY2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 AC098818.2-201ENST00000564925 2320 ntBASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 CRYGEP-201ENST00000412192 528 ntBASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 RPS8P6-201ENST00000426177 609 ntBASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 KRT18P2-201ENST00000447938 1258 ntBASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 AL020996.1-203ENST00000536896 2307 ntBASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC74BQ96LY2 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 AP000997.3-201ENST00000623333 2250 ntBASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 HCG11-201ENST00000411553 5696 ntBASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC74BQ96LY2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms