Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CALR3Q96L12 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CALR3Q96L12 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.74■□□□□ 0.59
CALR3Q96L12 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.74■□□□□ 0.59
CALR3Q96L12 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.74■□□□□ 0.59
CALR3Q96L12 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.74■□□□□ 0.59
CALR3Q96L12 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 KRT18P48-201ENST00000434763 852 ntBASIC18.74■□□□□ 0.59
CALR3Q96L12 RASA4DP-201ENST00000460726 1199 ntBASIC18.74■□□□□ 0.59
CALR3Q96L12 AC112698.1-201ENST00000510299 916 ntBASIC18.74■□□□□ 0.59
CALR3Q96L12 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.74■□□□□ 0.59
CALR3Q96L12 GCSHP2-201ENST00000560971 527 ntBASIC18.74■□□□□ 0.59
CALR3Q96L12 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.74■□□□□ 0.59
CALR3Q96L12 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.74■□□□□ 0.59
CALR3Q96L12 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CALR3Q96L12 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.74■□□□□ 0.59
CALR3Q96L12 AL391807.1-203ENST00000604392 2365 ntBASIC18.74■□□□□ 0.59
CALR3Q96L12 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 AC068418.2-201ENST00000577309 3703 ntBASIC18.73■□□□□ 0.59
CALR3Q96L12 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.73■□□□□ 0.59
CALR3Q96L12 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 TSPY12P-201ENST00000421279 868 ntBASIC18.73■□□□□ 0.59
CALR3Q96L12 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.73■□□□□ 0.59
CALR3Q96L12 AL136038.4-201ENST00000603606 1261 ntBASIC18.73■□□□□ 0.59
CALR3Q96L12 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CALR3Q96L12 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CALR3Q96L12 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.73■□□□□ 0.59
CALR3Q96L12 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
CALR3Q96L12 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CALR3Q96L12 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CALR3Q96L12 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CALR3Q96L12 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.72■□□□□ 0.59
CALR3Q96L12 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CALR3Q96L12 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CALR3Q96L12 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CALR3Q96L12 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CALR3Q96L12 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CALR3Q96L12 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms