Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 AC069262.1-201ENST00000539058 672 ntBASIC14.95□□□□□ -0.02
SPG11Q96JI7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 AL121761.2-201ENST00000598007 1648 ntBASIC14.95□□□□□ -0.02
SPG11Q96JI7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.95□□□□□ -0.02
SPG11Q96JI7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SPG11Q96JI7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AL627223.1-201ENST00000416693 442 ntBASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 GAPDHP21-201ENST00000450301 1010 ntBASIC14.94□□□□□ -0.02
SPG11Q96JI7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC051619.7-201ENST00000568314 623 ntBASIC14.94□□□□□ -0.02
SPG11Q96JI7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC008667.4-201ENST00000607370 168 ntBASIC14.94□□□□□ -0.02
SPG11Q96JI7 AC091812.2-201ENST00000619081 385 ntBASIC14.94□□□□□ -0.02
SPG11Q96JI7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SPG11Q96JI7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.94□□□□□ -0.02
SPG11Q96JI7 BCAR1-209ENST00000546196 1340 ntBASIC14.94□□□□□ -0.02
SPG11Q96JI7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 AP002414.1-201ENST00000391405 1147 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 AL359881.2-201ENST00000602973 570 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 AC068137.2-201ENST00000605408 478 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 AD001527.2-201ENST00000622994 785 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 AC004790.2-201ENST00000623588 572 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SPG11Q96JI7 MIR661-201ENST00000384842 89 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.93□□□□□ -0.02
SPG11Q96JI7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SPG11Q96JI7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SPG11Q96JI7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.92□□□□□ -0.02
SPG11Q96JI7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms