Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 AC022211.2-201ENST00000585075 2527 ntBASIC18.03■□□□□ 0.48
RTP4Q96DX8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.03■□□□□ 0.48
RTP4Q96DX8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTP4Q96DX8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 AL645929.1-201ENST00000420084 975 ntBASIC18.02■□□□□ 0.48
RTP4Q96DX8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.02■□□□□ 0.48
RTP4Q96DX8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.02■□□□□ 0.48
RTP4Q96DX8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RTP4Q96DX8 PCDHA12-202ENST00000613593 2588 ntBASIC18.02■□□□□ 0.47
RTP4Q96DX8 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RTP4Q96DX8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.02■□□□□ 0.47
RTP4Q96DX8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTP4Q96DX8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RTP4Q96DX8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 AD000864.1-201ENST00000624076 2295 ntBASIC18.01■□□□□ 0.47
RTP4Q96DX8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 AC019129.2-201ENST00000609837 1235 ntBASIC18.01■□□□□ 0.47
RTP4Q96DX8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.01■□□□□ 0.47
RTP4Q96DX8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTP4Q96DX8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18■□□□□ 0.47
RTP4Q96DX8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 AC125634.1-201ENST00000438758 1403 ntBASIC18■□□□□ 0.47
RTP4Q96DX8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RTP4Q96DX8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18■□□□□ 0.47
RTP4Q96DX8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 AL845331.1-201ENST00000424978 1190 ntBASIC18■□□□□ 0.47
RTP4Q96DX8 AC007967.3-201ENST00000434308 558 ntBASIC18■□□□□ 0.47
RTP4Q96DX8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18■□□□□ 0.47
RTP4Q96DX8 GUSBP12-201ENST00000513727 720 ntBASIC18■□□□□ 0.47
RTP4Q96DX8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18■□□□□ 0.47
RTP4Q96DX8 TK1-204ENST00000590430 683 ntTSL 3 BASIC18■□□□□ 0.47
RTP4Q96DX8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTP4Q96DX8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18■□□□□ 0.47
RTP4Q96DX8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18■□□□□ 0.47
RTP4Q96DX8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms