Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 SPDYE15P-201ENST00000424157 909 ntBASIC17.87■□□□□ 0.45
LRRC39Q96DD0 MTCL1P1-201ENST00000446207 792 ntBASIC17.87■□□□□ 0.45
LRRC39Q96DD0 ATP5G1P1-201ENST00000448724 379 ntBASIC17.87■□□□□ 0.45
LRRC39Q96DD0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LRRC39Q96DD0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 MIR662-201ENST00000384847 95 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AL596275.1-201ENST00000423464 877 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AC002558.1-201ENST00000488906 803 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AP003733.1-201ENST00000491725 852 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 NKILA-202ENST00000614771 2598 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AL353692.3-201ENST00000407031 1396 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AC116353.5-201ENST00000638148 1699 ntBASIC17.86■□□□□ 0.45
LRRC39Q96DD0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRRC39Q96DD0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 BX664615.1-201ENST00000443558 458 ntBASIC17.85■□□□□ 0.45
LRRC39Q96DD0 AC068472.1-201ENST00000474589 881 ntBASIC17.85■□□□□ 0.45
LRRC39Q96DD0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 AC010203.1-204ENST00000548782 407 ntBASIC17.85■□□□□ 0.45
LRRC39Q96DD0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 AL139327.4-201ENST00000612362 153 ntBASIC17.85■□□□□ 0.45
LRRC39Q96DD0 AC097374.2-201ENST00000618617 1306 ntBASIC17.85■□□□□ 0.45
LRRC39Q96DD0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC39Q96DD0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC39Q96DD0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC39Q96DD0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC39Q96DD0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC39Q96DD0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC39Q96DD0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC39Q96DD0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms