Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 SPDYE21P-201ENST00000413323 827 ntBASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 AL139288.1-201ENST00000623748 933 ntBASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ECHDC3Q96DC8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 AL356309.3-201ENST00000624132 1934 ntBASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 MYCLP1-201ENST00000372451 1075 ntBASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 IGHV3-52-201ENST00000519770 353 ntBASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 SART3-203ENST00000546611 1184 ntBASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ECHDC3Q96DC8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AC003669.1-201ENST00000334569 611 ntBASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 SCARNA2-201ENST00000458748 420 ntBASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ECHDC3Q96DC8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ECHDC3Q96DC8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms