Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 DDX43P3-201ENST00000441064 443 ntBASIC21.69■■□□□ 1.06
RPGRQ92834 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC21.69■■□□□ 1.06
RPGRQ92834 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 AL353135.1-201ENST00000606729 504 ntBASIC21.69■■□□□ 1.06
RPGRQ92834 AC106028.4-201ENST00000614509 607 ntBASIC21.69■■□□□ 1.06
RPGRQ92834 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.69■■□□□ 1.06
RPGRQ92834 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RPGRQ92834 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.69■■□□□ 1.06
RPGRQ92834 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPGRQ92834 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
RPGRQ92834 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.68■■□□□ 1.06
RPGRQ92834 FAM58CP-201ENST00000435741 640 ntBASIC21.68■■□□□ 1.06
RPGRQ92834 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.68■■□□□ 1.06
RPGRQ92834 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.68■■□□□ 1.06
RPGRQ92834 MIR3197-201ENST00000582241 73 ntBASIC21.68■■□□□ 1.06
RPGRQ92834 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.68■■□□□ 1.06
RPGRQ92834 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RPGRQ92834 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.67■■□□□ 1.06
RPGRQ92834 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 AC025580.3-201ENST00000617932 1424 ntBASIC21.67■■□□□ 1.06
RPGRQ92834 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.67■■□□□ 1.06
RPGRQ92834 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC21.67■■□□□ 1.06
RPGRQ92834 RHOQP3-201ENST00000437982 621 ntBASIC21.67■■□□□ 1.06
RPGRQ92834 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC21.67■■□□□ 1.06
RPGRQ92834 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RPGRQ92834 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.67■■□□□ 1.06
RPGRQ92834 OR7E47P-204ENST00000575924 449 ntBASIC21.67■■□□□ 1.06
RPGRQ92834 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC21.67■■□□□ 1.06
RPGRQ92834 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.67■■□□□ 1.06
RPGRQ92834 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.67■■□□□ 1.06
RPGRQ92834 AC027612.4-201ENST00000605371 583 ntBASIC21.67■■□□□ 1.06
RPGRQ92834 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RPGRQ92834 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPGRQ92834 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RPGRQ92834 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RPGRQ92834 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.66■■□□□ 1.06
RPGRQ92834 AC074386.1-202ENST00000463561 864 ntBASIC21.66■■□□□ 1.06
RPGRQ92834 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
RPGRQ92834 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC21.66■■□□□ 1.06
RPGRQ92834 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.66■■□□□ 1.06
RPGRQ92834 AC007064.4-201ENST00000637740 555 ntBASIC21.66■■□□□ 1.06
RPGRQ92834 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.66■■□□□ 1.06
RPGRQ92834 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.66■■□□□ 1.06
RPGRQ92834 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RPGRQ92834 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPGRQ92834 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms