Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 MRPL3P1-201ENST00000400109 1033 ntBASIC16.73■□□□□ 0.27
TM9SF4Q92544 AL590627.1-203ENST00000421194 1026 ntBASIC16.73■□□□□ 0.27
TM9SF4Q92544 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 AP005901.3-202ENST00000581653 237 ntBASIC16.73■□□□□ 0.27
TM9SF4Q92544 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TM9SF4Q92544 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TM9SF4Q92544 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 AC023511.2-201ENST00000618803 211 ntBASIC16.72■□□□□ 0.27
TM9SF4Q92544 AC117500.6-201ENST00000624871 588 ntBASIC16.72■□□□□ 0.27
TM9SF4Q92544 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TM9SF4Q92544 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TM9SF4Q92544 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 HLA-A-201ENST00000376802 1334 ntBASIC16.71■□□□□ 0.27
TM9SF4Q92544 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 MIR5100-201ENST00000579544 119 ntBASIC16.71■□□□□ 0.27
TM9SF4Q92544 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.71■□□□□ 0.27
TM9SF4Q92544 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.71■□□□□ 0.27
TM9SF4Q92544 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 GNAS-203ENST00000306120 1878 ntBASIC16.71■□□□□ 0.27
TM9SF4Q92544 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TM9SF4Q92544 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms