Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MBD3L1Q8WWY6 HOXB1-202ENST00000577092 1414 ntBASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 AC009065.1-201ENST00000564055 1225 ntBASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L1Q8WWY6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.9□□□□□ -0.19
MBD3L1Q8WWY6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
MBD3L1Q8WWY6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.9□□□□□ -0.19
MBD3L1Q8WWY6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 AC105917.1-201ENST00000506637 2539 ntBASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 DDX43P3-201ENST00000441064 443 ntBASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 MIR3180-5-201ENST00000583743 153 ntBASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 LINC00554-201ENST00000564841 3011 ntBASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 KRT8P7-201ENST00000533003 1432 ntBASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L1Q8WWY6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L1Q8WWY6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms