Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RTN4IP1Q8WWV3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 FER1L4-210ENST00000615531 5998 ntBASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ATP5G1P1-201ENST00000448724 379 ntBASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AC024243.1-201ENST00000609234 778 ntBASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AC005363.2-201ENST00000618631 242 ntBASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AC141257.4-201ENST00000634557 245 ntBASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AC136944.6-201ENST00000634818 245 ntBASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RTN4IP1Q8WWV3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 AC113347.1-201ENST00000413321 391 ntBASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 SEC1P-202ENST00000473944 940 ntBASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 AC010203.1-204ENST00000548782 407 ntBASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 AC010240.3-201ENST00000607688 395 ntBASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 AL138966.2-201ENST00000621997 464 ntBASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RTN4IP1Q8WWV3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RTN4IP1Q8WWV3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms