Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 MIR3687-2-201ENST00000577708 61 ntBASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 MIR3687-1-201ENST00000614492 61 ntBASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CCNB3Q8WWL7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 NCF1C-201ENST00000438382 1427 ntBASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 DDX43P3-201ENST00000441064 443 ntBASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 KRT18P2-201ENST00000447938 1258 ntBASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CCNB3Q8WWL7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 AC003669.1-201ENST00000334569 611 ntBASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 AC108073.2-201ENST00000464002 357 ntBASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 AC134684.3-201ENST00000641758 218 ntBASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CCNB3Q8WWL7 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC27.09■■□□□ 1.93
CCNB3Q8WWL7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 NOC2LP1-202ENST00000452600 2235 ntBASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC27.08■■□□□ 1.93
CCNB3Q8WWL7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.92
CCNB3Q8WWL7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
CCNB3Q8WWL7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.92
CCNB3Q8WWL7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CCNB3Q8WWL7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms